From ac829171d961e4da076a9bf636fea532a396aca9 Mon Sep 17 00:00:00 2001
From: Piotr Oleszczyk <piotr@oleszczyk.eu>
Date: Sat, 28 Feb 2026 17:59:11 +0100
Subject: [PATCH] feat(mcp): add FastMCP server with 14 tools for LLM agent
 access

- Add backend/innercontext/mcp_server.py with tools covering products,
  inventory, routines, skin snapshots, medications, lab results, and
  grooming schedule
- Mount MCP app at /mcp in main.py using combine_lifespans
- Fix test isolation: patch app.router.lifespan_context in conftest to
  avoid StreamableHTTPSessionManager single-run limitation

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
---
 backend/innercontext/mcp_server.py | 438 ++++++++++++++++++++
 backend/main.py                    |  13 +-
 backend/pyproject.toml             |   1 +
 backend/tests/conftest.py          |  18 +-
 backend/uv.lock                    | 633 +++++++++++++++++++++++++++++
 5 files changed, 1101 insertions(+), 2 deletions(-)
 create mode 100644 backend/innercontext/mcp_server.py

diff --git a/backend/innercontext/mcp_server.py b/backend/innercontext/mcp_server.py
new file mode 100644
index 0000000..618f267
--- /dev/null
+++ b/backend/innercontext/mcp_server.py
@@ -0,0 +1,438 @@
+from __future__ import annotations
+
+from datetime import date, timedelta
+from typing import Optional
+from uuid import UUID
+
+from fastmcp import FastMCP
+from sqlmodel import Session, col, select
+
+from db import engine
+from innercontext.models import (
+    GroomingSchedule,
+    LabResult,
+    MedicationEntry,
+    MedicationUsage,
+    Product,
+    ProductInventory,
+    Routine,
+    RoutineStep,
+    SkinConditionSnapshot,
+)
+
+mcp = FastMCP("innercontext")
+
+
+# ── Products ──────────────────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_products(
+    category: Optional[str] = None,
+    is_medication: bool = False,
+    is_tool: bool = False,
+) -> list[dict]:
+    """List products. By default returns skincare products (excludes medications and tools).
+    Pass is_medication=True or is_tool=True to retrieve those categories instead."""
+    with Session(engine) as session:
+        stmt = select(Product)
+        if category is not None:
+            stmt = stmt.where(Product.category == category)
+        stmt = stmt.where(Product.is_medication == is_medication)
+        stmt = stmt.where(Product.is_tool == is_tool)
+        products = session.exec(stmt).all()
+        return [p.to_llm_context() for p in products]
+
+
+@mcp.tool()
+def get_product(product_id: str) -> dict:
+    """Get full context for a single product (UUID) including all inventory entries."""
+    with Session(engine) as session:
+        product = session.get(Product, UUID(product_id))
+        if product is None:
+            return {"error": f"Product {product_id} not found"}
+        ctx = product.to_llm_context()
+        entries = session.exec(
+            select(ProductInventory).where(ProductInventory.product_id == product.id)
+        ).all()
+        ctx["inventory"] = [
+            {
+                "id": str(inv.id),
+                "is_opened": inv.is_opened,
+                "opened_at": inv.opened_at.isoformat() if inv.opened_at else None,
+                "finished_at": inv.finished_at.isoformat() if inv.finished_at else None,
+                "expiry_date": inv.expiry_date.isoformat() if inv.expiry_date else None,
+                "current_weight_g": inv.current_weight_g,
+            }
+            for inv in entries
+        ]
+        return ctx
+
+
+# ── Inventory ─────────────────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_open_inventory() -> list[dict]:
+    """Return all currently open packages (is_opened=True, finished_at=None)
+    with product name, opening date, weight, and expiry date."""
+    with Session(engine) as session:
+        stmt = (
+            select(ProductInventory, Product)
+            .join(Product, ProductInventory.product_id == Product.id)
+            .where(ProductInventory.is_opened == True)  # noqa: E712
+            .where(ProductInventory.finished_at == None)  # noqa: E711
+        )
+        rows = session.exec(stmt).all()
+        return [
+            {
+                "inventory_id": str(inv.id),
+                "product_id": str(product.id),
+                "product_name": product.name,
+                "brand": product.brand,
+                "opened_at": inv.opened_at.isoformat() if inv.opened_at else None,
+                "current_weight_g": inv.current_weight_g,
+                "expiry_date": inv.expiry_date.isoformat() if inv.expiry_date else None,
+            }
+            for inv, product in rows
+        ]
+
+
+# ── Routines ──────────────────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_recent_routines(days: int = 14) -> list[dict]:
+    """Get skincare routines from the last N days, newest first.
+    Each routine includes its ordered steps with product name or action."""
+    with Session(engine) as session:
+        cutoff = date.today() - timedelta(days=days)
+        routines = session.exec(
+            select(Routine)
+            .where(Routine.routine_date >= cutoff)
+            .order_by(col(Routine.routine_date).desc())
+        ).all()
+
+        result = []
+        for routine in routines:
+            steps = session.exec(
+                select(RoutineStep)
+                .where(RoutineStep.routine_id == routine.id)
+                .order_by(RoutineStep.order_index)
+            ).all()
+
+            steps_data = []
+            for step in steps:
+                step_dict: dict = {"order": step.order_index}
+                if step.product_id:
+                    product = session.get(Product, step.product_id)
+                    if product:
+                        step_dict["product"] = product.name
+                        step_dict["product_id"] = str(product.id)
+                if step.action_type:
+                    step_dict["action"] = (
+                        step.action_type.value
+                        if hasattr(step.action_type, "value")
+                        else str(step.action_type)
+                    )
+                if step.action_notes:
+                    step_dict["notes"] = step.action_notes
+                if step.dose:
+                    step_dict["dose"] = step.dose
+                if step.region:
+                    step_dict["region"] = step.region
+                steps_data.append(step_dict)
+
+            result.append(
+                {
+                    "id": str(routine.id),
+                    "date": routine.routine_date.isoformat(),
+                    "part_of_day": (
+                        routine.part_of_day.value
+                        if hasattr(routine.part_of_day, "value")
+                        else str(routine.part_of_day)
+                    ),
+                    "notes": routine.notes,
+                    "steps": steps_data,
+                }
+            )
+
+        return result
+
+
+# ── Skin snapshots ────────────────────────────────────────────────────────────
+
+
+def _snapshot_to_dict(s: SkinConditionSnapshot, *, full: bool) -> dict:
+    def ev(v: object) -> object:
+        return v.value if v is not None and hasattr(v, "value") else v
+
+    d: dict = {
+        "id": str(s.id),
+        "date": s.snapshot_date.isoformat(),
+        "overall_state": ev(s.overall_state),
+        "hydration_level": s.hydration_level,
+        "sensitivity_level": s.sensitivity_level,
+        "barrier_state": ev(s.barrier_state),
+        "active_concerns": [ev(c) for c in (s.active_concerns or [])],
+    }
+    if full:
+        d.update(
+            {
+                "skin_type": ev(s.skin_type),
+                "texture": ev(s.texture),
+                "sebum_tzone": s.sebum_tzone,
+                "sebum_cheeks": s.sebum_cheeks,
+                "risks": s.risks or [],
+                "priorities": s.priorities or [],
+                "notes": s.notes,
+            }
+        )
+    return d
+
+
+@mcp.tool()
+def get_latest_skin_snapshot() -> dict | None:
+    """Get the most recent skin condition snapshot with all metrics."""
+    with Session(engine) as session:
+        snapshot = session.exec(
+            select(SkinConditionSnapshot).order_by(
+                col(SkinConditionSnapshot.snapshot_date).desc()
+            )
+        ).first()
+        if snapshot is None:
+            return None
+        return _snapshot_to_dict(snapshot, full=True)
+
+
+@mcp.tool()
+def get_skin_history(weeks: int = 8) -> list[dict]:
+    """Get skin condition snapshots from the last N weeks with key metrics."""
+    with Session(engine) as session:
+        cutoff = date.today() - timedelta(weeks=weeks)
+        snapshots = session.exec(
+            select(SkinConditionSnapshot)
+            .where(SkinConditionSnapshot.snapshot_date >= cutoff)
+            .order_by(col(SkinConditionSnapshot.snapshot_date).desc())
+        ).all()
+        return [_snapshot_to_dict(s, full=False) for s in snapshots]
+
+
+@mcp.tool()
+def get_skin_snapshot_dates() -> list[str]:
+    """List all dates (YYYY-MM-DD) for which skin snapshots exist, newest first."""
+    with Session(engine) as session:
+        snapshots = session.exec(
+            select(SkinConditionSnapshot).order_by(
+                col(SkinConditionSnapshot.snapshot_date).desc()
+            )
+        ).all()
+        return [s.snapshot_date.isoformat() for s in snapshots]
+
+
+@mcp.tool()
+def get_skin_snapshot(snapshot_date: str) -> dict | None:
+    """Get the full skin condition snapshot for a specific date (YYYY-MM-DD)."""
+    with Session(engine) as session:
+        target = date.fromisoformat(snapshot_date)
+        snapshot = session.exec(
+            select(SkinConditionSnapshot).where(
+                SkinConditionSnapshot.snapshot_date == target
+            )
+        ).first()
+        if snapshot is None:
+            return None
+        return _snapshot_to_dict(snapshot, full=True)
+
+
+# ── Health / medications ───────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_medications() -> list[dict]:
+    """Get all medication entries with their currently active usage records
+    (valid_to IS NULL or >= today)."""
+    with Session(engine) as session:
+        medications = session.exec(select(MedicationEntry)).all()
+        today = date.today()
+        result = []
+        for med in medications:
+            usages = session.exec(
+                select(MedicationUsage)
+                .where(MedicationUsage.medication_record_id == med.record_id)
+                .where(
+                    (MedicationUsage.valid_to == None)  # noqa: E711
+                    | (col(MedicationUsage.valid_to) >= today)
+                )
+            ).all()
+            result.append(
+                {
+                    "id": str(med.record_id),
+                    "product_name": med.product_name,
+                    "kind": (
+                        med.kind.value if hasattr(med.kind, "value") else str(med.kind)
+                    ),
+                    "active_substance": med.active_substance,
+                    "formulation": med.formulation,
+                    "route": med.route,
+                    "notes": med.notes,
+                    "active_usages": [
+                        {
+                            "id": str(u.record_id),
+                            "dose": (
+                                f"{u.dose_value} {u.dose_unit}"
+                                if u.dose_value is not None and u.dose_unit
+                                else None
+                            ),
+                            "frequency": u.frequency,
+                            "schedule_text": u.schedule_text,
+                            "as_needed": u.as_needed,
+                            "valid_from": u.valid_from.isoformat()
+                            if u.valid_from
+                            else None,
+                            "valid_to": u.valid_to.isoformat() if u.valid_to else None,
+                        }
+                        for u in usages
+                    ],
+                }
+            )
+        return result
+
+
+# ── Expiring inventory ────────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_expiring_inventory(days: int = 30) -> list[dict]:
+    """List open packages whose expiry date falls within the next N days.
+    Sorted by days remaining (soonest first)."""
+    with Session(engine) as session:
+        cutoff = date.today() + timedelta(days=days)
+        stmt = (
+            select(ProductInventory, Product)
+            .join(Product, ProductInventory.product_id == Product.id)
+            .where(ProductInventory.is_opened == True)  # noqa: E712
+            .where(ProductInventory.finished_at == None)  # noqa: E711
+            .where(ProductInventory.expiry_date != None)  # noqa: E711
+            .where(col(ProductInventory.expiry_date) <= cutoff)
+        )
+        rows = session.exec(stmt).all()
+        today = date.today()
+        result = [
+            {
+                "product_name": product.name,
+                "brand": product.brand,
+                "expiry_date": inv.expiry_date.isoformat() if inv.expiry_date else None,
+                "days_remaining": (inv.expiry_date - today).days
+                if inv.expiry_date
+                else None,
+                "current_weight_g": inv.current_weight_g,
+            }
+            for inv, product in rows
+        ]
+        return sorted(result, key=lambda x: x["days_remaining"] or 0)
+
+
+# ── Grooming schedule ─────────────────────────────────────────────────────────
+
+
+@mcp.tool()
+def get_grooming_schedule() -> list[dict]:
+    """Get the full grooming schedule sorted by day of week (0=Monday, 6=Sunday)."""
+    with Session(engine) as session:
+        entries = session.exec(
+            select(GroomingSchedule).order_by(GroomingSchedule.day_of_week)
+        ).all()
+        return [
+            {
+                "id": str(e.id),
+                "day_of_week": e.day_of_week,
+                "action": (
+                    e.action.value if hasattr(e.action, "value") else str(e.action)
+                ),
+                "notes": e.notes,
+            }
+            for e in entries
+        ]
+
+
+# ── Lab results ───────────────────────────────────────────────────────────────
+
+
+def _lab_result_to_dict(r: LabResult) -> dict:
+    return {
+        "id": str(r.record_id),
+        "collected_at": r.collected_at.isoformat(),
+        "test_code": r.test_code,
+        "test_name_loinc": r.test_name_loinc,
+        "test_name_original": r.test_name_original,
+        "value_num": r.value_num,
+        "value_text": r.value_text,
+        "value_bool": r.value_bool,
+        "unit": r.unit_ucum or r.unit_original,
+        "ref_low": r.ref_low,
+        "ref_high": r.ref_high,
+        "ref_text": r.ref_text,
+        "flag": r.flag.value if r.flag and hasattr(r.flag, "value") else r.flag,
+        "lab": r.lab,
+        "notes": r.notes,
+    }
+
+
+@mcp.tool()
+def get_recent_lab_results(limit: int = 30) -> list[dict]:
+    """Get the most recent lab results sorted by collection date descending."""
+    with Session(engine) as session:
+        results = session.exec(
+            select(LabResult)
+            .order_by(col(LabResult.collected_at).desc())
+            .limit(limit)
+        ).all()
+        return [_lab_result_to_dict(r) for r in results]
+
+
+@mcp.tool()
+def get_available_lab_tests() -> list[dict]:
+    """List all distinct lab tests ever performed, grouped by LOINC test_code.
+    Returns test_code, LOINC name, original lab names, result count, and last collection date."""
+    with Session(engine) as session:
+        results = session.exec(select(LabResult)).all()
+        tests: dict[str, dict] = {}
+        for r in results:
+            code = r.test_code
+            if code not in tests:
+                tests[code] = {
+                    "test_code": code,
+                    "test_name_loinc": r.test_name_loinc,
+                    "test_names_original": set(),
+                    "count": 0,
+                    "last_collected_at": r.collected_at,
+                }
+            tests[code]["count"] += 1
+            if r.test_name_original:
+                tests[code]["test_names_original"].add(r.test_name_original)
+            if r.collected_at > tests[code]["last_collected_at"]:
+                tests[code]["last_collected_at"] = r.collected_at
+
+        return [
+            {
+                "test_code": v["test_code"],
+                "test_name_loinc": v["test_name_loinc"],
+                "test_names_original": sorted(v["test_names_original"]),
+                "count": v["count"],
+                "last_collected_at": v["last_collected_at"].isoformat(),
+            }
+            for v in sorted(tests.values(), key=lambda x: x["test_code"])
+        ]
+
+
+@mcp.tool()
+def get_lab_results_for_test(test_code: str) -> list[dict]:
+    """Get the full chronological history of results for a specific LOINC test code."""
+    with Session(engine) as session:
+        results = session.exec(
+            select(LabResult)
+            .where(LabResult.test_code == test_code)
+            .order_by(col(LabResult.collected_at).asc())
+        ).all()
+        return [_lab_result_to_dict(r) for r in results]
diff --git a/backend/main.py b/backend/main.py
index 4f0810a..93c035a 100644
--- a/backend/main.py
+++ b/backend/main.py
@@ -6,6 +6,7 @@ load_dotenv()  # load .env before db.py reads DATABASE_URL
 
 from fastapi import FastAPI  # noqa: E402
 from fastapi.middleware.cors import CORSMiddleware  # noqa: E402
+from fastmcp.utilities.lifespan import combine_lifespans  # noqa: E402
 
 from db import create_db_and_tables  # noqa: E402
 from innercontext.api import (  # noqa: E402
@@ -15,6 +16,9 @@ from innercontext.api import (  # noqa: E402
     routines,
     skincare,
 )
+from innercontext.mcp_server import mcp  # noqa: E402
+
+mcp_app = mcp.http_app(path="/mcp")
 
 
 @asynccontextmanager
@@ -23,7 +27,11 @@ async def lifespan(app: FastAPI):
     yield
 
 
-app = FastAPI(title="innercontext API", lifespan=lifespan, redirect_slashes=False)
+app = FastAPI(
+    title="innercontext API",
+    lifespan=combine_lifespans(lifespan, mcp_app.lifespan),
+    redirect_slashes=False,
+)
 
 app.add_middleware(
     CORSMiddleware,  # ty: ignore[invalid-argument-type]
@@ -39,6 +47,9 @@ app.include_router(routines.router, prefix="/routines", tags=["routines"])
 app.include_router(skincare.router, prefix="/skincare", tags=["skincare"])
 
 
+app.mount("/mcp", mcp_app)
+
+
 @app.get("/health-check")
 def health_check():
     return {"status": "ok"}
diff --git a/backend/pyproject.toml b/backend/pyproject.toml
index 40ca052..1dbbe7d 100644
--- a/backend/pyproject.toml
+++ b/backend/pyproject.toml
@@ -6,6 +6,7 @@ readme = "README.md"
 requires-python = ">=3.12"
 dependencies = [
     "fastapi>=0.132.0",
+    "fastmcp>=2.0",
     "google-genai>=1.65.0",
     "psycopg>=3.3.3",
     "python-dotenv>=1.2.1",
diff --git a/backend/tests/conftest.py b/backend/tests/conftest.py
index 7085b78..2cc5b80 100644
--- a/backend/tests/conftest.py
+++ b/backend/tests/conftest.py
@@ -1,4 +1,5 @@
 import os
+from contextlib import asynccontextmanager
 
 # Must be set before importing db (which calls create_engine at module level)
 os.environ.setdefault("DATABASE_URL", "sqlite://")
@@ -13,6 +14,18 @@ from db import get_session
 from main import app
 
 
+@asynccontextmanager
+async def _db_only_lifespan(a):
+    """Lifespan without the MCP server for test isolation.
+
+    StreamableHTTPSessionManager.run() can only be called once per instance,
+    which conflicts with the per-test TestClient lifecycle. We replace the
+    combined (db + MCP) lifespan with one that only does DB setup.
+    """
+    db_module.create_db_and_tables()
+    yield
+
+
 @pytest.fixture()
 def session(monkeypatch):
     """Per-test fresh SQLite in-memory database with full isolation."""
@@ -32,8 +45,11 @@ def session(monkeypatch):
 
 
 @pytest.fixture()
-def client(session):
+def client(session, monkeypatch):
     """TestClient using the per-test session for every request."""
+    # Replace combined (db+MCP) lifespan with DB-only to avoid the
+    # StreamableHTTPSessionManager single-run limitation.
+    monkeypatch.setattr(app.router, "lifespan_context", _db_only_lifespan)
 
     def _override():
         yield session
diff --git a/backend/uv.lock b/backend/uv.lock
index 3e0e142..d58b2fa 100644
--- a/backend/uv.lock
+++ b/backend/uv.lock
@@ -2,6 +2,18 @@ version = 1
 revision = 3
 requires-python = ">=3.12"
 
+[[package]]
+name = "aiofile"
+version = "3.9.0"
+source = { registry = "https://pypi.org/simple" }
+dependencies = [
+    { name = "caio" },
+]
+sdist = { url = "https://files.pythonhosted.org/packages/67/e2/d7cb819de8df6b5c1968a2756c3cb4122d4fa2b8fc768b53b7c9e5edb646/aiofile-3.9.0.tar.gz", hash = "sha256:e5ad718bb148b265b6df1b3752c4d1d83024b93da9bd599df74b9d9ffcf7919b", size = 17943, upload-time = "2024-10-08T10:39:35.846Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/50/25/da1f0b4dd970e52bf5a36c204c107e11a0c6d3ed195eba0bfbc664c312b2/aiofile-3.9.0-py3-none-any.whl", hash = "sha256:ce2f6c1571538cbdfa0143b04e16b208ecb0e9cb4148e528af8a640ed51cc8aa", size = 19539, upload-time = "2024-10-08T10:39:32.955Z" },
+]
+
 [[package]]
 name = "annotated-doc"
 version = "0.0.4"
@@ -33,6 +45,36 @@ wheels = [
     { url = "https://files.pythonhosted.org/packages/38/0e/27be9fdef66e72d64c0cdc3cc2823101b80585f8119b5c112c2e8f5f7dab/anyio-4.12.1-py3-none-any.whl", hash = "sha256:d405828884fc140aa80a3c667b8beed277f1dfedec42ba031bd6ac3db606ab6c", size = 113592, upload-time = "2026-01-06T11:45:19.497Z" },
 ]
 
+[[package]]
+name = "attrs"
+version = "25.4.0"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/6b/5c/685e6633917e101e5dcb62b9dd76946cbb57c26e133bae9e0cd36033c0a9/attrs-25.4.0.tar.gz", hash = "sha256:16d5969b87f0859ef33a48b35d55ac1be6e42ae49d5e853b597db70c35c57e11", size = 934251, upload-time = "2025-10-06T13:54:44.725Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/3a/2a/7cc015f5b9f5db42b7d48157e23356022889fc354a2813c15934b7cb5c0e/attrs-25.4.0-py3-none-any.whl", hash = "sha256:adcf7e2a1fb3b36ac48d97835bb6d8ade15b8dcce26aba8bf1d14847b57a3373", size = 67615, upload-time = "2025-10-06T13:54:43.17Z" },
+]
+
+[[package]]
+name = "authlib"
+version = "1.6.8"
+source = { registry = "https://pypi.org/simple" }
+dependencies = [
+    { name = "cryptography" },
+]
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