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Piotr Oleszczyk 3c1dcbeb06 feat(backend): add Alembic migrations
- Add alembic 1.14 to dependencies (uv sync → 1.18.4 installed)
- Configure alembic/env.py: loads DATABASE_URL from env, imports all
  SQLModel models so metadata is fully populated for autogenerate
- Generate initial migration (c2d626a2b36c) covering all 9 tables:
  products, product_inventory, medication_entries, medication_usages,
  lab_results, routines, routine_steps, grooming_schedule,
  skin_condition_snapshots — with all indexes and constraints
- Add ExecStartPre to innercontext.service: runs alembic upgrade head
  before uvicorn starts (idempotent, safe on every restart)
- Update DEPLOYMENT.md: add migration step to backend setup and update
  flow; document alembic stamp head for existing installations

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
2026-02-28 20:14:57 +01:00
backend feat(backend): add Alembic migrations 2026-02-28 20:14:57 +01:00
docs feat(backend): add Alembic migrations 2026-02-28 20:14:57 +01:00
frontend feat: add deployment guide, nginx/systemd configs, switch to adapter-node 2026-02-28 20:09:00 +01:00
nginx feat: add deployment guide, nginx/systemd configs, switch to adapter-node 2026-02-28 20:09:00 +01:00
systemd feat(backend): add Alembic migrations 2026-02-28 20:14:57 +01:00
.gitignore fix: load .env via python-dotenv; SQLite default for local dev 2026-02-26 20:51:13 +01:00
CLAUDE.md Initial commit: backend API, data models, and test suite 2026-02-26 15:10:24 +01:00
README.md feat: add deployment guide, nginx/systemd configs, switch to adapter-node 2026-02-28 20:09:00 +01:00

innercontext

Personal health and skincare data hub. Collects structured data (products, routines, lab results, medications, skin snapshots) and exposes it via a REST API, MCP, and a web UI to an LLM agent.

Repository layout

backend/    Python backend — FastAPI REST API + MCP server + SQLModel models
frontend/   SvelteKit web UI (Svelte 5, TypeScript, Tailwind CSS v4)
docs/       Deployment guides
nginx/      nginx config for production
systemd/    systemd service units

Backend quick start

Requirements: Python 3.12+, PostgreSQL, uv

cd backend

# Install dependencies
uv sync

# Set database URL (defaults to postgresql+psycopg://localhost/innercontext)
export DATABASE_URL=postgresql+psycopg://user:password@localhost/innercontext

# Start the API server (creates tables on first run)
uv run uvicorn main:app --reload

API docs available at http://localhost:8000/docs.

Frontend quick start

Requirements: Node.js 22+, pnpm

cd frontend

# Install dependencies
pnpm install

# Start dev server (proxies API calls to localhost:8000)
pnpm dev

UI available at http://localhost:5173.

API overview

Prefix Resource
/products Skincare / medication products + inventory
/inventory Individual inventory entries
/health/medications Medication entries and usage history
/health/lab-results Lab test results
/routines AM/PM skincare routines and steps
/routines/grooming-schedule Weekly grooming schedule
/skincare Weekly skin condition snapshots
/health-check Liveness probe

MCP server

innercontext exposes 14 tools via FastMCP at the StreamableHTTP endpoint http://localhost:8000/mcp/mcp.

Tools include: get_products, get_product, get_open_inventory, get_recent_routines, get_latest_skin_snapshot, get_skin_history, get_medications, get_expiring_inventory, get_grooming_schedule, get_recent_lab_results, and more.

Connect an MCP-compatible LLM agent by pointing it at http://<host>/mcp/mcp.

Frontend routes

Route Description
/ Dashboard
/products Product list
/products/new Add product
/products/[id] Product detail / edit
/routines Routine list
/routines/new Create routine
/routines/[id] Routine detail
/health/medications Medications
/health/lab-results Lab results
/skin Skin condition snapshots

Development

cd backend

# Lint
uv run ruff check .

# Format
uv run black .
uv run isort .

# Tests
uv run pytest

Stack

  • Backend: Python 3.12, FastAPI, Uvicorn, SQLModel 0.0.37 + SQLAlchemy, Pydantic v2, PostgreSQL (psycopg3)
  • MCP: FastMCP 3.0.2 (StreamableHTTP transport)
  • Frontend: SvelteKit 2, Svelte 5 (Runes), TypeScript, Tailwind CSS v4, shadcn-svelte

Deployment

See docs/DEPLOYMENT.md for a step-by-step guide for a Proxmox LXC setup (Debian 13, nginx, systemd services).